MicrobiotaProcess - A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework
MicrobiotaProcess is an R package for analysis, visualization and biomarker discovery of microbial datasets. It introduces MPSE class, this make it more interoperable with the existing computing ecosystem. Moreover, it introduces a tidy microbiome data structure paradigm and analysis grammar. It provides a wide variety of microbiome data analysis procedures under the unified and common framework (tidy-like framework).
Last updated 2 months ago
visualizationmicrobiomesoftwaremultiplecomparisonfeatureextraction
174 stars 5.31 score 102 dependenciesggstar - Multiple Geometric Shape Point Layer for 'ggplot2'
To create the multiple polygonal point layer for easily discernible shapes, we developed the package, it is like the 'geom_point' of 'ggplot2'. It can be used to draw the scatter plot.
Last updated 5 months ago
98 stars 4.22 score 29 dependencies 2 dependentsggtreeExtra - An R Package To Add Geometric Layers On Circular Or Other Layout Tree Of "ggtree"
'ggtreeExtra' extends the method for mapping and visualizing associated data on phylogenetic tree using 'ggtree'. These associated data can be presented on the external panels to circular layout, fan layout, or other rectangular layout tree built by 'ggtree' with the grammar of 'ggplot2'.
Last updated 4 months ago
softwarevisualizationphylogeneticsannotation
86 stars 4.07 score 52 dependencies 1 dependents