ggtreeExtra - An R Package To Add Geometric Layers On Circular Or Other Layout Tree Of "ggtree"

'ggtreeExtra' extends the method for mapping and visualizing associated data on phylogenetic tree using 'ggtree'. These associated data can be presented on the external panels to circular layout, fan layout, or other rectangular layout tree built by 'ggtree' with the grammar of 'ggplot2'.

Last updated 23 days ago

softwarevisualizationphylogeneticsannotation

9.64 score 87 stars 2 packages 370 scripts 1.5k downloads

MicrobiotaProcess - A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework

MicrobiotaProcess is an R package for analysis, visualization and biomarker discovery of microbial datasets. It introduces MPSE class, this make it more interoperable with the existing computing ecosystem. Moreover, it introduces a tidy microbiome data structure paradigm and analysis grammar. It provides a wide variety of microbiome data analysis procedures under the unified and common framework (tidy-like framework).

Last updated 23 days ago

visualizationmicrobiomesoftwaremultiplecomparisonfeatureextractionmicrobiome-analysismicrobiome-data

9.30 score 182 stars 130 scripts 687 downloads

ggstar - Multiple Geometric Shape Point Layer for 'ggplot2'

To create the multiple polygonal point layer for easily discernible shapes, we developed the package, it is like the 'geom_point' of 'ggplot2'. It can be used to draw the scatter plot.

Last updated 8 months ago

7.99 score 99 stars 2 packages 286 scripts 1.2k downloads